miRBase entry: bmo-mir-3258

Stem-loop bmo-mir-3258


Accession
MI0014314
Description
Bombyx mori bmo-mir-3258 precursor miRNA


Sequence

auuggauuaGAAAACCACCGCGUUGGGUACGUcuaaaaugccacgcggcucacuggaucuaaaaugccacgugguuuguuuacuagcugcaauc
((((.(((((.((((.(((((((..((((.(((((....(((....)))....)))))......)))))))))))..)))).)))).).)))).

Structure
-    g -    A    -C       UG    -----C     aaau   a 
 auug a uuaG AAAC  ACCGCGU  GGUA      GUcua    gcc c
 |||| | |||| ||||  |||||||  ||||      |||||    |||  
 uaac u gauc uuug  uggugca  ccgu      uaggu    cgg g
c    g c    a    uu       --    aaaauc     cacu   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582019.1: 3070419-3070512 [+]

Database links

Mature bmo-miR-3258

Accession MIMAT0015442
Description Bombyx mori bmo-miR-3258 mature miRNA
Sequence 10 - GAAAACCACCGCGUUGGGUACGU - 32
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415