miRBase entry: bmo-mir-3304a

Stem-loop bmo-mir-3304a


Accession
MI0014361
Description
Bombyx mori bmo-mir-3304a precursor miRNA


Sequence

217 reads, 10 reads per million, 3 experiments
cagucucccuauuaaugauauuccaagucauuuuaauuuugucaggugcauuuuuuauaagauugccuaagugcaaugacuuggccaauguacagacuuuuuUAAACAGCUUGGAAUAUUUACAGaca
..((((..........((((((((((((...(((((....(((..(((((((............(((.((((......))))))).))))))).)))....)))))..))))))))))))...)))).

Structure
ca    cccuauuaau            cau     uuuu   ag       uuuuauaagauu   u    gc 
  gucu          gauauuccaagu   uuuaa    guc  gugcauu            gcc aagu  a
  ||||          ||||||||||||   |||||    |||  |||||||            ||| ||||   
  caGA          UUAUAAGGUUCG   AAAUu    cag  cauguaa            cgg uuca  a
-a    -------CAU            -AC     uuuu   -a       -----------c   -    gu 


Annotation confidence Not enough data
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Genome context
NW_004581680.1: 946395-946522 [+]

Database links

Mature bmo-miR-3304a

Accession MIMAT0015492
Description Bombyx mori bmo-miR-3304a mature miRNA
Sequence 103 - UAAACAGCUUGGAAUAUUUACAG - 125
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415