miRBase entry: bmo-mir-3310

Stem-loop bmo-mir-3310


Accession
MI0014367
Description
Bombyx mori bmo-mir-3310 precursor miRNA


Sequence

3 reads, 1 reads per million, 1 experiments
agcgguagacccgcaucccGCAGCUUGUAAACCAGCCCCUCGugccacacacggucgaaggcuuucucgaugucgagaaagaccgcgaccguguauuggcccgaguuguaccgguccgccaagugaugcaggacgcgagucaguugca
.((((..(((.(((.(((.((((((((...(((.((..((((.((((.(((((((((..((((((((((....)))))))).)).)))))))))..)))).))))..))...)))....)))))..))).))).))).)))..)))).

Structure
a    ua   c   a   c   --     -UAA   --A  CC    u    -c         aa  -        a 
 gcgg  gac cgc ucc GCA  GCUUG    ACC   GC  CUCG gcca  acacggucg  gg cuuucucg u
 ||||  ||| ||| ||| |||  |||||    |||   ||  |||| ||||  |||||||||  || ||||||||  
 cguu  cug gcg agg cgu  ugaac    ugg   ug  gagc cggu  ugugccagc  cc gaaagagc g
a    ga   a   c   a   ag     cgcc   cca  uu    c    ua         -g  a        u 


Annotation confidence Not enough data
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Genome context
NW_004581537.1: 1355-1502 [-]

Database links

Mature bmo-miR-3310

Accession MIMAT0015499
Description Bombyx mori bmo-miR-3310 mature miRNA
Sequence 20 - GCAGCUUGUAAACCAGCCCCUCG - 42
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415