miRBase entry: bmo-mir-3325

Stem-loop bmo-mir-3325


Accession
MI0014383
Description
Bombyx mori bmo-mir-3325 precursor miRNA


Sequence

76 reads, 11 reads per million, 3 experiments
ggcaaguguguauuggccagaucaccccucauuauaucugaagcaaguacaaguaaacaaucaguaccagcaaaaagaaaacuguuguuacuugaggauaaauuugaCAGUGAUGAGUCAAAUACACCAgca
.((..((((((.(((((...(((((...(((...(((((..........(((((((.(((.((((...............)))))))))))))).)))))....)))..)))))..)))))))))))..)).

Structure
g  aa      a     cag     ccc   -uua     gaagcaagua       a   u    accagc 
 gc  gugugu uuggc   aucac   uca    uaucu          caaguaa caa cagu      a
 ||  |||||| |||||   |||||   |||    |||||          ||||||| ||| ||||      a
 cg  CACAUA AACUG   UAGUG   agu    auagg          guucauu guu guca      a
a  AC      -     -AG     -AC   uuaa     ---------a       -   -    aaagaa 


Annotation confidence Not enough data
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Genome context
NW_004581808.1: 138568-138699 [+]

Database links

Mature bmo-miR-3325

Accession MIMAT0015512
Description Bombyx mori bmo-miR-3325 mature miRNA
Sequence 108 - CAGUGAUGAGUCAAAUACACCA - 129
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415