Stem-loop bmo-mir-3327

Accession

MI0014385

Description

Bombyx mori bmo-mir-3327 precursor miRNA

Gene family

MIPF0001547; mir-3327

Literature search

1 open access papers mention bmo-mir-3327
(1 sentences)

Sequence

agaacauuuuggguaauguauaAACAACAGGAAUGUUAUGUACaguauacagauaauucuAUAUGUAACGUUUUUGUUGUCCUaaauuacucuacuaccucaacu
..........(((((((......(((((((((((((((((((.((.............)).))))))))))))))))))).....))))))).............

Structure

---agaacauuuu       guauaA                   C  uauac 
             ggguaau      ACAACAGGAAUGUUAUGUA ag     a
             |||||||      ||||||||||||||||||| ||     g
             cucauua      UGUUGUUUUUGCAAUGUAU uc     a
ucaacuccaucau       -aaUCC                   A  uuaau 

Annotation confidence Not enough data

Genome context

NW_004582013.1: 6563612-6563716 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-3327

Mature bmo-miR-3327-5p

• Accession: MIMAT0015514
• Description: Bombyx mori bmo-miR-3327-5p mature miRNA
• Sequence: 23 - AACAACAGGAAUGUUAUGUAC - 43
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3327-3p

• Accession: MIMAT0015515
• Description: Bombyx mori bmo-miR-3327-3p mature miRNA
• Sequence: 61 - AUAUGUAACGUUUUUGUUGUCCU - 83
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415