miRBase entry: bmo-mir-3328

Stem-loop bmo-mir-3328


Accession
MI0014386
Description
Bombyx mori bmo-mir-3328 precursor miRNA


Sequence

15 reads, 8 reads per million, 3 experiments
uccagauuggagaggaccauggagauguagaagaauugaugaucccuucauccaacauuuuagaaauuugggauuggacuucuUGUUUGUGCACUUCAGGGAAUCUAUaugauuuu
.(((...)))(((...((.(((((.((((.(((....((.(.(((..((..((((.((((...))))))))))..)))).))...))).)))))))))))...)))..........

Structure
uccagauugg   gga  a     a    g   aauu  u a   cu  au    c    u 
          aga   cc uggag ugua aag    ga g ucc  uc  ccaa auuu  
          |||   || ||||| |||| |||    || | |||  ||  |||| |||| a
          UCU   GG ACUUC ACGU UUU    cu c agg  ag  gguu uaaa  
uuuuaguaUA   AAG  -     -    G   -GUu  u -   uu  --    -    g 


Annotation confidence Not enough data
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Genome context
NW_004581808.1: 308156-308271 [+]

Database links

Mature bmo-miR-3328

Accession MIMAT0015516
Description Bombyx mori bmo-miR-3328 mature miRNA
Sequence 84 - UGUUUGUGCACUUCAGGGAAUCUAU - 108
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415