miRBase entry: bmo-mir-3350

Stem-loop bmo-mir-3350


Accession
MI0014408
Description
Bombyx mori bmo-mir-3350 precursor miRNA


Sequence

56 reads, 18 reads per million, 3 experiments
uacguacaaagauuuauuaaaaauaaaaauaagaauugucauacaugcauguguuuuaaauugucgguagucggugauaauaauauguuUCAUGUAUUCUAAUUUUUCUUUAUAugcuuauauuuauauuguaauuguau
(((((((((........(((..(((.(((.((((((((..(((((((.(((((((....(((((((........))))))))))))))..)))))))..)))))))).))).)))..)))........)))))..)))).

Structure
-    --     agauuuau   aa   a   u        uc       -c       uuaa       gua 
 uacg  uacaa        uaa  aua aaa aagaauug  auacaug  auguguu    auugucg   g
 ||||  |||||        |||  ||| ||| ||||||||  |||||||  |||||||    |||||||    
 augu  auguu        auu  uAU UUU UUUUUAAU  UAUGUAC  uguauaa    uaauagu   u
u    ua     auauuuau   cg   A   C        CU       Uu       ----       ggc 


Annotation confidence Not enough data
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Genome context
NW_004617072.1: 409-548 [+]

Database links

Mature bmo-miR-3350

Accession MIMAT0015535
Description Bombyx mori bmo-miR-3350 mature miRNA
Sequence 90 - UCAUGUAUUCUAAUUUUUCUUUAUA - 114
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415