miRBase entry: bmo-mir-3375

Stem-loop bmo-mir-3375


Accession
MI0014436
Description
Bombyx mori bmo-mir-3375 precursor miRNA


Sequence

90 reads, 22 reads per million, 3 experiments
uguguuuguucagguccccagcUCCAUGUGUAAUUCUUCUUGGUuagucgaguaagcgguucUGCUAUCUUUGAAAAGUUUGGAAUAaacuuccugaaccaagagcaug
.(((((((((((((........((((.....((((.(((..((.((((.(((.......))).)))).))..))).))))))))........)))))))...)))))).

Structure
u      ---       uccccagc    UGUGU    C   UU  U    c   ua 
 guguuu   guucagg        UCCA     AAUU UUC  GG uagu gag  a
 ||||||   |||||||        ||||     |||| |||  || |||| |||  g
 uacgag   caagucc        AGGU     UUGA AAG  UC AUCG cuu  c
g      aac       uucaaAUA    -----    A   UU  U    U   gg 


Annotation confidence Not enough data
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Genome context
NW_004610308.1: 422-530 [+]

Database links

Mature bmo-miR-3375-5p

Accession MIMAT0015565
Description Bombyx mori bmo-miR-3375-5p mature miRNA
Sequence 23 - UCCAUGUGUAAUUCUUCUUGGU - 44
Evidence experimental
SOLID [1]

Mature bmo-miR-3375-3p

Accession MIMAT0015566
Description Bombyx mori bmo-miR-3375-3p mature miRNA
Sequence 63 - UGCUAUCUUUGAAAAGUUUGGAAUA - 87
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415