miRBase entry: bmo-mir-3387

Stem-loop bmo-mir-3387


Accession
MI0014448
Description
Bombyx mori bmo-mir-3387 precursor miRNA


Sequence

248 reads, 34 reads per million, 3 experiments
uugcugccuuuguugacuaacaACAUUAAUGAAAACGAUCGUGgacuaccuuuaacgccgauauuacaagugcuaauugcuuugagauuuuacgcaacaggcaauuUUCAGGUUCGUGCAUAAUGUGCUuuugugucuacauaauagaa
...(((....(((.((((((..((((((.((...((((.(.((((...(((....((.....(((.((((.((.....)))))).)))....))....))).....)))).).)))).))))))))....))).))).)))...)))..

Structure
uug   ccuu   u   -   --ca      A  AAA    U G    --cua   uuaa  ccgau   a    u  u 
   cug    ugu gac uaa    ACAUUA UG   ACGA C UGga     ccu    cg     auu caag gc a
   |||    ||| ||| |||    |||||| ||   |||| | ||||     |||    ||     ||| |||| || a
   gau    aca cug guu    UGUAAU AC   UGCU G ACUU     gga    gc     uag guuu cg u
-aa   -aau   u   u   uUCG      -  --G    U G    uuaac   caac  -auuu   a    -  u 


Annotation confidence Not enough data
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Genome context
NW_004582012.1: 8227703-8227851 [-]

Database links

Mature bmo-miR-3387-5p

Accession MIMAT0015585
Description Bombyx mori bmo-miR-3387-5p mature miRNA
Sequence 23 - ACAUUAAUGAAAACGAUCGUG - 43
Evidence experimental
SOLID [1]
Database links

Mature bmo-miR-3387-3p

Accession MIMAT0015586
Description Bombyx mori bmo-miR-3387-3p mature miRNA
Sequence 107 - UUCAGGUUCGUGCAUAAUGUGCU - 129
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415