Stem-loop bmo-mir-2733i

Accession

MI0014452

Description

Bombyx mori bmo-mir-2733i precursor miRNA

Gene family

MIPF0000766; mir-2733

Literature search

1 open access papers mention bmo-mir-2733i
(4 sentences)

Sequence

5 reads, 1 reads per million, 2 experiments

acguugucuacagugucuguuaauaauAGUUGUUACUUCCUCAGAUGAcauuauauauugUCACUGGGAAUGUAAUGACUAUuuucaacagaccguaacugcaaaccg
..((.((.(((.(.(((((((...((((((((((((((((.(((.(((((........)))))))))))).))))))))))))...))))))))))))).))......

Structure

----ac  u  c   a u       aau            -    U   A     uua 
      gu gu uac g gucuguu   aauAGUUGUUAC UUCC CAG UGAca   u
      || || ||| | |||||||   |||||||||||| |||| ||| |||||    
      cg ca aug c cagacaa   uUAUCAGUAAUG AAGG GUC ACUgu   a
gccaaa  u  -   - -       cuu            U    -   -     uau 

Annotation confidence Not enough data

Genome context

NW_004581684.1: 344891-344998 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from bmo-mir-2733i

Mature bmo-miR-2733i-5p

• Accession: MIMAT0015591
• Description: Bombyx mori bmo-miR-2733i-5p mature miRNA
• Sequence: 28 - AGUUGUUACUUCCUCAGAUGA - 48
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-2733i-3p

• Accession: MIMAT0015592
• Description: Bombyx mori bmo-miR-2733i-3p mature miRNA
• Sequence: 61 - UCACUGGGAAUGUAAUGACUAU - 82
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415