miRBase entry: bmo-mir-3402

Stem-loop bmo-mir-3402


Accession
MI0014465
Description
Bombyx mori bmo-mir-3402 precursor miRNA


Sequence

10 reads, 4 reads per million, 2 experiments
ggguaaaggcccgaaaagauccacUGCAAUAACUUUAAACCGCUGAGCUggaacuggagucuggaguagucccgcucgcuuaaaguuagacggcugguaccgcuggcacucuauaca
((((....))))...................(((((((...((.((((.(((.(((..........)))))).)))))))))))))((((..((((((...))))))..))))....

Structure
ggguaaaggcccgaaaagauccacUGCAAUA       ACC  U    U   a   gagu 
                               ACUUUAA   GC GAGC gga cug    c
                               |||||||   || |||| ||| |||     
                               ugaaauu   cg cucg ccu gau    u
acauaucucacggucgccauggucggcagau       ---  -    c   -   gagg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581799.1: 344225-344341 [+]

Database links

Mature bmo-miR-3402

Accession MIMAT0015606
Description Bombyx mori bmo-miR-3402 mature miRNA
Sequence 25 - UGCAAUAACUUUAAACCGCUGAGCU - 49
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415