miRBase entry: bmo-mir-3204b

Stem-loop bmo-mir-3204b


Accession
MI0014495
Description
Bombyx mori bmo-mir-3204b precursor miRNA
Gene family
MIPF0000908; mir-3204


Sequence

6 reads, 2 reads per million, 3 experiments
ugaauguagacaucaaggccUGCGUCAUAAACUUCCCAUAUgauuucccauaugggaguuuaugacuugggcuucguugucuuugucc
.((....(((((.(.(((((((.((((((((((.((((((((......)))))))))))))))))).))))))).).)))))...)).

Structure
u  augu     u a       C          U        au 
 ga    agaca c aggccUG GUCAUAAACU CCCAUAUg  u
 ||    ||||| | ||||||| |||||||||| ||||||||   
 cu    ucugu g uucgggu caguauuuga ggguauac  u
c  -guu     u c       u          -        cc 


Annotation confidence Not enough data
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Genome context
NW_004582015.1: 5514235-5514322 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3204b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3204b

Accession MIMAT0015638
Description Bombyx mori bmo-miR-3204b mature miRNA
Sequence 21 - UGCGUCAUAAACUUCCCAUAU - 41
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415