miRBase entry: mmu-mir-3471-2

Stem-loop mmu-mir-3471-2


Accession
MI0014701
Symbol
MGI: Mir3471-2
Description
Mus musculus mmu-mir-3471-2 precursor miRNA
Gene family
MIPF0001053; mir-3471

Literature search
1 open access papers mention mmu-mir-3471-2
(1 sentences)

Sequence

4880 reads, 451 reads per million, 65 experiments
agaaaugccuccaUGAGAUCCAACUGUAAGGCAUUuucccaauuagugauaaaggggaaaaggccccuugugggugggacaaucucugggcugguagucuug
(((..((((.((..(((((((.(((.(((((..(((((((..(((....)))..)))))))....)))))..))).)))...))))..))..)))).)))..

Structure
--   aa    -u  aU    ---   A   -G     --CA       aa   g 
  aga  ugcc  cc  GAGA   UCC ACU  UAAGG    UUuuccc  uua u
  |||  ||||  ||  ||||   ||| |||  |||||    |||||||  |||  
  ucu  augg  gg  cucu   agg ugg  guucc    aaaaggg  aau g
gu   -g    uc  gu    aac   g   gu     ccgg       ga   a 


Annotation confidence Not enough data
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Genome context
chr4: 3537090-3537191 [+]

Database links

Mature mmu-miR-3471

Accession MIMAT0015642
Description Mus musculus mmu-miR-3471 mature miRNA
Sequence 14 - UGAGAUCCAACUGUAAGGCAUU - 35
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471