miRBase entry: ppy-let-7b

Stem-loop ppy-let-7b


Accession
MI0014782
Description
Pongo pygmaeus ppy-let-7b precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
2 open access papers mention ppy-let-7b
(5 sentences)

Sequence

cggggUGAGGUAGUAGGUUGUGUGGUUucagggcagugauguugccccucagaagauaacuauacaaccuacugccuucccug
(((((.(((((((((((((((((((((((.((((((.....)))))).......)).))))))))))))))))))))))))))

Structure
     U                     -  ------a      u 
cgggg GAGGUAGUAGGUUGUGUGGUU uc       gggcag g
||||| ||||||||||||||||||||| ||       |||||| a
guccc uuccgucauccaacauaucaa ag       cccguu u
     -                     u  aagacuc      g 


Annotation confidence Not enough data
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Genome context
chr22: 41541671-41541753 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-let-7b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-let-7b

Accession MIMAT0015722
Description Pongo pygmaeus ppy-let-7b mature miRNA
Sequence 6 - UGAGGUAGUAGGUUGUGUGGUU - 27
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64