miRBase entry: ppy-let-7i

Stem-loop ppy-let-7i


Accession
MI0014789
Description
Pongo pygmaeus ppy-let-7i precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
2 open access papers mention ppy-let-7i
(5 sentences)

Sequence

cuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaacugcgcaagcuacugccuugcua
.((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))

Structure
c    U                 U   --------  u     ugu 
 uggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
 |||| ||||||||||||||||| |||        || |||||   a
 aucg uuccgucaucgaacgcg caa        uc gcccg   c
-    -                 u   uagaggug  -     uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr12: 62645578-62645661 [+]

Database links

Mature ppy-let-7i

Accession MIMAT0015728
Description Pongo pygmaeus ppy-let-7i mature miRNA
Sequence 6 - UGAGGUAGUAGUUUGUGCUGUU - 27
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64