Stem-loop sequence sja-mir-310

Accession

MI0015298 (change log)

Description

Schistosoma japonicum miR-310 stem-loop

Literature search

1 open access papers mention sja-mir-310
(2 sentences)

Stem-loop

   guagaga   ggga     --a     gaugacgcgacucucguggagaguacuuauccgaagaugacuucau 
5'        auu    gauau   gucaa                                              c
          |||    |||||   |||||                                              g
3'        uaa    uugua   uaguu                                              a
   ----cag   -aag     agg     uccggcccuuaaacguuauaaguggcugguauuuggugacugcaaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (ASM15177v1; GCA_000151775.1): CABF01020650.1: 1788-1929 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0015298

Mature sequence sja-miR-310

• Accession: MIMAT0016271
• Sequence: 101 - auauugcaaauucccggccuuu - 122
• Evidence: experimental; Illumina [1]

References

1. PMID:20161724 "An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum" Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W PLoS Negl Trop Dis. 4:e596(2010).