miRBase entry: sja-mir-3483

Stem-loop sja-mir-3483


Accession
MI0015306
Description
Schistosoma japonicum sja-mir-3483 precursor miRNA


Sequence

aaucuucaccAGCUGAGAUGGUUAGGACAUguguuacauAUGCCUGACCACCGUCUACUUugaagagcaa
..((((((..((..(((.((((((((.((((((...)))))))))))))).).))..)).))))))....

Structure
--aa      cc  CU  - A        A      u 
    ucuuca  AG  GA G UGGUUAGG CAUgug  
    ||||||  ||  || | |||||||| |||||| u
    agaagu  UC  CU C ACCAGUCC GUAuac  
aacg      -U  AU  G C        -      a 


Annotation confidence Not enough data
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Genome context
CABF01002528.1: 5110-5179 [-]

Database links

Mature sja-miR-3483-5p

Accession MIMAT0016286
Description Schistosoma japonicum sja-miR-3483-5p mature miRNA
Sequence 11 - AGCUGAGAUGGUUAGGACAU - 30
Evidence experimental
Illumina [1]

Mature sja-miR-3483-3p

Accession MIMAT0016287
Description Schistosoma japonicum sja-miR-3483-3p mature miRNA
Sequence 40 - AUGCCUGACCACCGUCUACUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20161724
    An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
    Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
    PLoS Negl Trop Dis (2010) 4:e596