Stem-loop sja-mir-3488

Accession

MI0015312

Description

Schistosoma japonicum sja-mir-3488 precursor miRNA

Sequence

uggugaaugacgauugaugauuauaauggcgcgcacguGCUCCGGUAGCUUAGUUGGUuagagcgccg
.((((..((((((((((.(.((((...(((((....)))))...))))))))))).))))...)))).

Structure

u    -aa    -      u a    aau     g 
 ggug   ugac gauuga g uuau   ggcgc c
 ||||   |||| |||||| | ||||   |||||  
 ccgc   auUG UUGAUU C GAUG   UCGug a
g    gag    G      - -    GCC     c 

Annotation confidence Not enough data

Genome context

CABF01065204.1: 482-549 [+]

Mature sja-miR-3488

• Accession: MIMAT0016297
• Description: Schistosoma japonicum sja-miR-3488 mature miRNA
• Sequence: 39 - GCUCCGGUAGCUUAGUUGGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596