Stem-loop sja-mir-3493

Accession

MI0015317

Description

Schistosoma japonicum sja-mir-3493 precursor miRNA

Sequence

aauggagccaUGGAUUUCAGUAGCAUCCACUgaacugauggaugcuugugaacucaucccaccuggcucugaa
...(((((((.((((((((..(((((((((......).))))))))..))))...))))....)))))))...

Structure

aau       ---U    ---    GU        - Ug 
   ggagcca    GGAU   UUCA  AGCAUCCA C  a
   |||||||    ||||   ||||  |||||||| |   
   ucucggu    ccua   aagu  ucguaggu g  a
aag       ccac    cuc    gu        a uc 

Annotation confidence Not enough data

Genome context

CABF01045188.1: 44-116 [+]

Mature sja-miR-3493

• Accession: MIMAT0016302
• Description: Schistosoma japonicum sja-miR-3493 mature miRNA
• Sequence: 11 - UGGAUUUCAGUAGCAUCCACU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596