miRBase entry: sja-mir-3495

Stem-loop sja-mir-3495


Accession
MI0015319
Description
Schistosoma japonicum sja-mir-3495 precursor miRNA


Sequence

agaugcagacuacaugguuggggcccacguggugaucguaacaaaugcuuaaagaccuuaugguUCAAAAUCGUUGGCAAUGGCUcaggugcauc
.((((((..((....(((((..(((.(((...(((((((((....(......)....)))))).)))....))).)))..))))).)).))))))

Structure
a      ga  acau     gg   c   -ugg   -      caaa gc 
 gaugca  cu    gguug  gcc acg    uga ucguaa    u  u
 ||||||  ||    |||||  ||| |||    ||| ||||||    |   
 cuacgu  ga    UCGGU  CGG UGC    ACU gguauu    a  u
-      -g  ---c     AA   U   UAAA   u      ccag aa 


Annotation confidence Not enough data
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Genome context
CABF01019868.1: 1620-1714 [-]

Database links

Mature sja-miR-3495

Accession MIMAT0016304
Description Schistosoma japonicum sja-miR-3495 mature miRNA
Sequence 65 - UCAAAAUCGUUGGCAAUGGCU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20161724
    An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
    Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
    PLoS Negl Trop Dis (2010) 4:e596