miRBase entry: sja-mir-3507

Stem-loop sja-mir-3507


Accession
MI0015331
Description
Schistosoma japonicum sja-mir-3507 precursor miRNA


Sequence

uagaugcuguuauuaacugcucagcucguuuuaacugauuuaguuucgacugagaaucaaaucagaAGAGAAUAGGGCAUGGGUACUgcugaugucu
.((((...((((.....(((((((((((((((..(((((((.(.(((......))).))))))))...))))).)))).))))))....))))))))

Structure
u    gcu    uuaac      -    -     -aa       a u   ga 
 agau   guua     ugcuca gcuc guuuu   cugauuu g uuc  c
 ||||   ||||     |||||| |||| |||||   ||||||| | |||   
 ucug   uagu     AUGGGU CGGG UAAGA   gacuaaa c aag  u
-    ---    -cgUC      A    A     GAa       - u   ag 


Annotation confidence Not enough data
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Genome context
CABF01061326.1: 51-147 [+]

Database links

Mature sja-miR-3507

Accession MIMAT0016316
Description Schistosoma japonicum sja-miR-3507 mature miRNA
Sequence 67 - AGAGAAUAGGGCAUGGGUACU - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20161724
    An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
    Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
    PLoS Negl Trop Dis (2010) 4:e596