Stem-loop ahy-MIR156b

Accession

MI0015333

Description

Arachis hypogaea ahy-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

5 open access papers mention ahy-MIR156b
(40 sentences)

Sequence

ggaggcacuauugguagaguugUUGACAGAAGAUAGAGAGCACaaaagaugauaugcauauagauauauauagucugcauuuuauuccuuuguGCUCUCUAAGCUUCUGUCAUCacucuucagccucuauuucua
((((((.....(((.(((((.(.(((((((((.(((((((((((((.(((((.(((((((((......))))...))))).)))))..)))))))))))))..))))))))).))))))))))))))).......

Structure

-------      acuau   u     u U         -A             -a     u     ---    ga 
       ggaggc     ugg agagu g UGACAGAAG  UAGAGAGCACaaa  gauga augca   uaua  u
       ||||||     ||| ||||| | |||||||||  |||||||||||||  ||||| |||||   ||||   
       ucuccg     acu ucuca C ACUGUCUUC  AUCUCUCGuguuu  uuauu uacgu   auau  a
aucuuua      -----   -     - U         GA             cc     u     cug    au 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR156b-5p

• Accession: MIMAT0016318
• Description: Arachis hypogaea ahy-miR156b-5p mature miRNA
• Sequence: 23 - UUGACAGAAGAUAGAGAGCAC - 43
• Evidence: experimental ; Illumina [1]

Mature ahy-miR156b-3p

• Accession: MIMAT0016319
• Description: Arachis hypogaea ahy-miR156b-3p mature miRNA
• Sequence: 94 - GCUCUCUAAGCUUCUGUCAUC - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3