![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence rno-mir-1188 |
||||||||
Accession | MI0015443 (change log) | |||||||
Description | Rattus norvegicus miR-1188 stem-loop | |||||||
Gene family | MIPF0001188; mir-1188 | |||||||
Literature search |
4 open access papers mention rno-mir-1188 | |||||||
Stem-loop |
- c ----u ag uu -a u aa c 5' gucu ucagc ggugug g gggcc gga ga c c |||| ||||| |||||| | ||||| ||| || | 3' caga agucg ccacac c cucgg ccu cu g a u - ucguc ca cc ag - cg a |
|||||||
Deep sequencing |
| |||||||
Confidence |
Annotation confidence: high
| |||||||
Genome context |
|
|||||||
Clustered miRNAs |
|
|||||||
Database links |
Mature sequence rno-miR-1188-5p |
|
Accession | MIMAT0017854 |
Sequence |
11 - uggugugagguugggccagga - 31 |
Deep sequencing | 414 reads, 88 experiments |
Evidence | experimental; SOLiD [1] |
Predicted targets |
|
Mature sequence rno-miR-1188-3p |
|
Accession | MIMAT0017855 |
Sequence |
49 - cgaggcuccccaccaca - 65 |
Deep sequencing | 160 reads, 57 experiments |
Evidence | experimental; SOLiD [1] |
Predicted targets |
|
References |
|
1 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
|