Stem-loop rno-mir-3587

Accession

MI0015463

Description

Rattus norvegicus rno-mir-3587 precursor miRNA

Sequence

reads, None reads per million, experiments

uuguguggucggcagcgaaguuguucuccaccaagAACACUGAUUUCAAAUGGUGCuagacaa
.(((.(((.((.((..(((((((((((......))))))...)))))...)).))))).))).

Structure

u   g   u  g  -gc     ---      cc 
 ugu ugg cg ca   gaagu   uguucu  a
 ||| ||| || ||   |||||   ||||||   
 aca auC GU GU   CUUUA   ACAAga  c
a   g   -  G  AAA     GUC      ac 

Annotation confidence Not enough data

Genome context

chr4: 58344283-58344345 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from rno-mir-3587

Mature rno-miR-3587

• Accession: MIMAT0017883
• Description: Rattus norvegicus rno-miR-3587 mature miRNA
• Sequence: 36 - AACACUGAUUUCAAAUGGUGC - 56
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249