Accession
MI0015633
Description
Ciona intestinalis
cin-mir-4080 precursor miRNA
Gene family
MIPF0001273;
mir-4079
Sequence
45
reads,
1
reads per million, 2 experiments
UGCUACAUCAGCUAGAGCUagcuguuccagCUAACCUAGUAGAUGAAGCA
((((.((((.(((((.(.((((((...)))))).)))))).)))).))))
((((.((((.(((((.(.((((((...)))))).)))))).)))).))))
Structure
A A A C u
UGCU CAUC GCUAG G Uagcug
|||| |||| ||||| | |||||| u
ACGA GUAG UGAUC C AUCgac
A A - A c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
7q: 1174112-1174161 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cin-mir-4080
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4080-5p
| Accession | MIMAT0016649 |
| Description | Ciona intestinalis cin-miR-4080-5p mature miRNA |
| Sequence | 1 - UGCUACAUCAGCUAGAGCU - 19 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4080-3p
| Accession | MIMAT0016650 |
| Description | Ciona intestinalis cin-miR-4080-3p mature miRNA |
| Sequence | 31 - CUAACCUAGUAGAUGAAGCA - 50 |
| Evidence |
experimental
Illumina [1] |
References
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