miRBase entry: cin-mir-4138

Stem-loop cin-mir-4138


Accession
MI0015693
Description
Ciona intestinalis cin-mir-4138 precursor miRNA


Sequence

UAGAUGAAGAGAGUAAUGAuucauugcuuggaacauuaucacaaacuucauuaa
..(((((((...((((((.((((.....)))).))))))......)))))))..

Structure
UA       ---AGA      A    u 
  GAUGAAG      GUAAUG uuca u
  |||||||      |||||| |||| g
  uuacuuc      uauuac aggu c
aa       aaacac      a    u 


Annotation confidence Not enough data
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Genome context
5q: 1748121-1748174 [-]

Database links

Mature cin-miR-4138-5p

Accession MIMAT0016735
Description Ciona intestinalis cin-miR-4138-5p mature miRNA
Sequence 1 - UAGAUGAAGAGAGUAAUGA - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39