miRBase entry: cin-mir-4190

Stem-loop cin-mir-4190


Accession
MI0015747
Description
Ciona intestinalis cin-mir-4190 precursor miRNA


Sequence

2 reads, 1 reads per million, 1 experiments
AUAUGAGUUUAUAUUUACAuauacauguauauguguguguaugggaaaggauuuuauau
(((((((.((.....(((((((((((....)))))))))))........)).)))))))

Structure
       U  ---AUAUU           g 
AUAUGAG UU        UACAuauacau u
||||||| ||        |||||||||||  
uauauuu ag        augugugugua a
       u  gaaagggu           u 


Annotation confidence Not enough data
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Genome context
12q: 2073982-2074040 [+]

Database links

Mature cin-miR-4190-5p

Accession MIMAT0016808
Description Ciona intestinalis cin-miR-4190-5p mature miRNA
Sequence 1 - AUAUGAGUUUAUAUUUACA - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39