miRBase entry: cin-mir-4208

Stem-loop cin-mir-4208


Accession
MI0015765
Description
Ciona intestinalis cin-mir-4208 precursor miRNA


Sequence

uuuaaauaacaugaucuuugcuaucguuuuuuaaaaaaaagauaaauaaaaaUGAUGUUAUUUUAGGUUU
...(((((((((.((.((((.((((.(((((....)))))))))..)))).)).))))))))).......

Structure
----uuu         g  c    -c    g     u 
       aaauaacau au uuug  uauc uuuuu a
       ||||||||| || ||||  |||| |||||  
       UUUAUUGUA Ua aaau  auag aaaaa a
UUUGGAU         G  a    aa    -     a 


Annotation confidence Not enough data
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Genome context
1q: 4390830-4390899 [-]

Database links

Mature cin-miR-4208-3p

Accession MIMAT0016829
Description Ciona intestinalis cin-miR-4208-3p mature miRNA
Sequence 53 - UGAUGUUAUUUUAGGUUU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39