miRBase entry: aly-MIR395i

Stem-loop aly-MIR395i


Accession
MI0015778
Description
Arabidopsis lyrata aly-MIR395i precursor miRNA
Gene family
MIPF0000016; MIR395


Sequence

cucaagaguuccuccgaacacuucauugaaaaaagguucuccauuuucguaauuuuuuuuuaCUGAAGUGUUUGGAGGAACUCcagaugauau
.((..((((((((((((((((((((.(((((((((((((.........).)))))))))))).))))))))))))))))))))..))......

Structure
-----c  aa                    u            - ucc 
      uc  gaguuccuccgaacacuuca ugaaaaaagguu c   a
      ||  |||||||||||||||||||| |||||||||||| |   u
      ag  CUCAAGGAGGUUUGUGAAGU auuuuuuuuuaa g   u
uauagu  ac                    C            u cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL348713.1: 10978703-10978795 [+]

Database links

Mature aly-miR395i

Accession MIMAT0017905
Description Arabidopsis lyrata aly-miR395i mature miRNA
Sequence 63 - CUGAAGUGUUUGGAGGAACUC - 83
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 20407023
    Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus
    "Ma Z, Coruh C, Axtell MJ"
    "Plant Cell (2010) 22:1090-1103