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miRBase |
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Stem-loop sequence ssc-mir-296 |
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Accession | MI0015906 (change log) | ||||
Description | Sus scrofa miR-296 stem-loop | ||||
Gene family | MIPF0000159; mir-296 | ||||
Literature search |
5 open access papers mention ssc-mir-296 | ||||
Stem-loop |
-- c c c - g ugc 5' ga ccuuc ggagggcc cc cccaauccu uug u || ||||| |||||||| || ||||||||| ||| g 3' cu ggaag ccuuucgg gg ggguuggga gac g gu c u a c - uua |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-296-5p |
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Accession | MIMAT0017952 |
Previous IDs | ssc-miR-296 |
Sequence |
11 - gagggccccccccaauccugu - 31 |
Deep sequencing | 19 reads, 6 experiments |
Evidence | experimental; Illumina [1-3] |
Mature sequence ssc-miR-296-3p |
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Accession | MIMAT0022958 |
Sequence |
46 - aggguugggcggaggcuuucc - 66 |
Deep sequencing | 256 reads, 15 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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2 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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3 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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