miRBase entry: hsa-mir-3622b

Stem-loop hsa-mir-3622b


Accession
MI0016014
Symbol
HGNC: MIR3622B
Description
Homo sapiens hsa-mir-3622b precursor miRNA
Gene family
MIPF0001179; mir-3622

Literature search
8 open access papers mention hsa-mir-3622b
(70 sentences)

Sequence

255 reads, 13 reads per million, 48 experiments
agugauauaauagagggugcacAGGCAUGGGAGGUCAGGUGAgcucagcucccugccUCACCUGAGCUCCCGUGCCUGugcacccucuauuggcu
.......((((((((((((((((((((((((((.(((((((((..(((....))).))))))))).))))))))))))))))))))))))))...

Structure
agugaua                          G         cu   c 
       uaauagagggugcacAGGCAUGGGAG UCAGGUGAg  cag u
       |||||||||||||||||||||||||| |||||||||  |||  
       guuaucucccacguGUCCGUGCCCUC AGUCCACUc  guc c
----ucg                          G         -c   c 


Annotation confidence Not enough data
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Genome context
chr8: 27701673-27701767 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-3622b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-3622b-5p

Accession MIMAT0018005
Description Homo sapiens hsa-miR-3622b-5p mature miRNA
Sequence 23 - AGGCAUGGGAGGUCAGGUGA - 42
Evidence experimental
Illumina [1]

Mature hsa-miR-3622b-3p

Accession MIMAT0018006
Description Homo sapiens hsa-miR-3622b-3p mature miRNA
Sequence 58 - UCACCUGAGCUCCCGUGCCUG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20459774
    Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
    Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
    BMC Biol (2010) 8:58