Stem-loop vvi-MIR3626

Accession

MI0016019

Description

Vitis vinifera vvi-MIR3626 precursor miRNA

Literature search

1 open access papers mention vvi-MIR3626
(2 sentences)

Sequence

115 reads, 9 reads per million, 2 experiments

gccuucaccGGUAGUCGCUGUGAAAUUGAAguauaguuugcgcuauuccaauggacagugcaaacuauaCUUCAAUUUCACAGCGACCACuggugaaggc
((((((((((((.(((((((((((((((((((((((((((((((..(((...))).))))))))))))))))))))))))))))))).))))))))))))

Structure

            A                               au   a 
gccuucaccGGU GUCGCUGUGAAAUUGAAguauaguuugcgcu  ucc  
|||||||||||| |||||||||||||||||||||||||||||||  ||| a
cggaagugguCA CAGCGACACUUUAACUUCauaucaaacguga  agg  
            C                               -c   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature vvi-miR3626-5p

• Accession: MIMAT0018015
• Description: Vitis vinifera vvi-miR3626-5p mature miRNA
• Sequence: 10 - GGUAGUCGCUGUGAAAUUGAA - 30
• Evidence: experimental ; Illumina [1]

Mature vvi-miR3626-3p

• Accession: MIMAT0018016
• Description: Vitis vinifera vvi-miR3626-3p mature miRNA
• Sequence: 70 - CUUCAAUUUCACAGCGACCAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20230504
   Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis
   "Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J"
   "Plant J (2010) 62:960-976