Stem-loop vvi-MIR3634

Accession

MI0016033

Description

Vitis vinifera vvi-MIR3634 precursor miRNA

Literature search

3 open access papers mention vvi-MIR3634
(7 sentences)

Sequence

1528 reads, 105 reads per million, 2 experiments

aggguggaguuuugugaagcuuauGGCAUAUGUGUGACGGAAAGAaagguguuuaaaucaugucUUUCCGACUCGCACUCAUGCCGUugguuucagaucacuccucccu
((((.(((((..(.(((((((.(((((((..((((((((((((((..(((......)))...))))))))..))))))..))))))).))))))).)..))))).))))

Structure

    u     uu g       u       AU      --        -aa   gu 
aggg ggagu  u ugaagcu auGGCAU  GUGUGA  CGGAAAGA   ggu  u
|||| |||||  | ||||||| |||||||  ||||||  ||||||||   |||   
uccc ccuca  a acuuugg UGCCGUA  CACGCU  GCCUUUcu   cua  u
    u     cu g       u       CU      CA        gua   aa 

Annotation confidence Not enough data

Genome context

chr17: 5681205-5681313 [-]

Mature vvi-miR3634-5p

• Accession: MIMAT0018039
• Description: Vitis vinifera vvi-miR3634-5p mature miRNA
• Sequence: 25 - GGCAUAUGUGUGACGGAAAGA - 45
• Evidence: experimental ; Illumina [1]

Mature vvi-miR3634-3p

• Accession: MIMAT0018040
• Description: Vitis vinifera vvi-miR3634-3p mature miRNA
• Sequence: 65 - UUUCCGACUCGCACUCAUGCCGU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20230504
   Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis
   "Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J"
   "Plant J (2010) 62:960-976