miRBase entry: hsa-mir-3665

Stem-loop hsa-mir-3665


Accession
MI0016066
Symbol
HGNC: MIR3665
Description
Homo sapiens hsa-mir-3665 precursor miRNA

Literature search
7 open access papers mention hsa-mir-3665
(13 sentences)

Sequence

96 reads, 146 reads per million, 36 experiments
gcgggcggcggcggcggcagcagcAGCAGGUGCGGGGCGGCGgccgcgcuggccgcucgacuccgcagcugcucguucugcuucuccagcuugcgcaccagcucc
(((((((..(((((.(((((.((((((((.(((((((((((((((.....)))))).)).))))))).))))).))))))))...)).)))..))).)).))...

Structure
---  -  -   gc   -  --c     c   -     G       -  -      g 
   gc gg gcg  ggc gg   ggcag agc AGCAG UGCGGGG CG GCGgcc c
   || || |||  ||| ||   ||||| ||| ||||| ||||||| || |||||| g
   cg cc cgc  ucg cc   ucguc uug ucguc acgccuc gc cgccgg c
ccu  a  a   gu   a  ucu     -   c     g       a  u      u 


Annotation confidence Not enough data
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Comments
This sequence was predicted as a miRNA by Xie et al. [1] and validated later by microarray [2].

Genome context
chr13: 77698012-77698116 [-]

Database links

Mature hsa-miR-3665

Accession MIMAT0018087
Description Homo sapiens hsa-miR-3665 mature miRNA
Sequence 25 - AGCAGGUGCGGGGCGGCG - 42
Evidence experimental
microarray [1]

References

  1. PubMed ID: 15735639
    Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    "Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M"
    "Nature (2005) 434:338-345

  2. PubMed ID: 20559549
    Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment
    Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M
    PLoS One (2010) 5:e11109