miRBase entry: ame-mir-307

Stem-loop ame-mir-307


Accession
MI0016139
Description
Apis mellifera ame-mir-307 precursor miRNA
Gene family
MIPF0000293; mir-67


Sequence

gaggagcaucucgaaaauggcggucacguggacucacucaaccugggugugaugcuugccuguguaucaggcccuagcggucaUCACAACCUUUUUGAGUGAGCGAacgcgacuguuuuaucgaccauaucca
..(((.....((((....(((((((.(((...(((((((((...((((((((((((.(((((.....)))))...)))....))))).))))..)))))))))...))).)))))))...)))).....))).

Structure
ga   gcauc    aaau       a   gga         ccu    -     ----   --u     u 
  gga     ucga    ggcgguc cgu   cucacucaa   gggu gugau    gcu   gccug g
  |||     ||||    ||||||| |||   |||||||||   |||| |||||    |||   ||||| u
  ccu     agcu    uugucag gca   GAGUGAGUU   UCCA CACUa    cga   cggac a
-a   auacc    -auu       c   AGC         -UU    A     cugg   ucc     u 


Annotation confidence Not enough data
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Genome context
CM000054.5: 7127563-7127695 [+]

Database links

Mature ame-miR-307-3p

Accession MIMAT0018509
Description Apis mellifera ame-miR-307-3p mature miRNA
Sequence 84 - UCACAACCUUUUUGAGUGAGCGA - 106
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670