miRBase entry: ame-mir-3745

Stem-loop ame-mir-3745


Accession
MI0016143
Description
Apis mellifera ame-mir-3745 precursor miRNA


Sequence

gcacgccgggggggugugguccacaguugguuacggugaaacggguuuggccaccgucccccguucucuggccgcugauucgucgagccCGGGUGCCACCCCCCGGCCCGGguga
.(((.(((((((((.(((((((.((((.(((..(((.(((.((((...(((....))).))))))).))))))))))......((....)))).))))).))))..)))))))).

Structure
g   g     --    u     -  acaguugguuacggugaaacggguuuggccaccgucccccguucucuggccgcugauucgu  a 
 cac ccggg  gggg guggu cc                                                             cg g
 ||| |||||  |||| ||||| ||                                                             ||  
 gug GGCCC  CCCC CACCG GG                                                             GC c
a   -     GG    C     U  -------------------------------------------------------------  c 


Annotation confidence Not enough data
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Genome context
CM000061.5: 9847888-9848002 [+]

Database links

Mature ame-miR-3745-3p

Accession MIMAT0018513
Description Apis mellifera ame-miR-3745-3p mature miRNA
Sequence 90 - CGGGUGCCACCCCCCGGCCCGG - 111
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226