miRBase entry: ame-mir-3746

Stem-loop ame-mir-3746


Accession
MI0016144
Description
Apis mellifera ame-mir-3746 precursor miRNA


Sequence

cuuucggaucuucuucucugacaaguuuacaguacaauauuuucuuuguuuuuuuuucuuuuuaugaggcacaaagcgagaagaaaCGCGGAGAGGAAGGUAUGCGUgucgagagaacagaugccucgaaaa
.((((((((((..((((((((((.((.....((((....(((((((((((((((((((.((((.((...)).)))).))))))))).))))))))))..)))))).)))).)))))).))))...)))))).

Structure
c      ---    uc      -    a  uuaca    aaua          -         u    a  a 
 uuucgg   aucu  uucucu gaca gu     guac    uuuucuuugu uuuuuuuuc uuuu ug  
 ||||||   ||||  |||||| |||| ||     ||||    |||||||||| ||||||||| |||| || g
 aaagcu   uaga  aagaga cugU CG     UAUG    AGGAGAGGCG aaagaagag gaaa ac  
a      ccg    -c      g    G  -----    --GA          C         c    c  g 


Annotation confidence Not enough data
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Genome context
CM000061.5: 9890594-9890725 [+]

Database links

Mature ame-miR-3746-3p

Accession MIMAT0018514
Description Apis mellifera ame-miR-3746-3p mature miRNA
Sequence 87 - CGCGGAGAGGAAGGUAUGCGU - 107
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805