miRBase entry: ame-mir-3718b

Stem-loop ame-mir-3718b


Accession
MI0016156
Description
Apis mellifera ame-mir-3718b precursor miRNA
Gene family
MIPF0001225; mir-3718


Sequence

uucgauucaguaccgauucucacuaUCGGGACAGGACAGGGGACAGAaugguuauaccgaaauggcccugcccuacccuauccugauccgauaauguaaaucgggaacgac
.(((.(((....((((((..((.(((((((.(((((.((((..(((...((((((......))))))))).....)))).))))).))))))).))..)))))))))))).

Structure
u   a   agua      cu  c       A     C    ---GA   Aau      ac 
 ucg uuc    ccgauu  ca uaUCGGG CAGGA AGGG     CAG   gguuau  c
 ||| |||    ||||||  || ||||||| ||||| ||||     |||   ||||||   
 agc aag    ggcuaa  gu auagccu guccu uccc     guc   ccggua  g
c   -   ----      au  a       a     a    auccc   ---      aa 


Annotation confidence Not enough data
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Genome context
CM000059.5: 6820246-6820356 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ame-mir-3718b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3718b-5p

Accession MIMAT0018526
Description Apis mellifera ame-miR-3718b-5p mature miRNA
Sequence 26 - UCGGGACAGGACAGGGGACAGA - 47
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805