miRBase entry: ame-mir-3722

Stem-loop ame-mir-3722


Accession
MI0016180
Description
Apis mellifera ame-mir-3722 precursor miRNA


Sequence

auggaaagucggugaaaccuugggaucggccagauCCGAUUCGAGGUGUGACGGUUucguucgaaauuagcuugcaacgaaucaggccucuuugcggauuuaaggggaccauuaacgauucu
..((((.((.((((...((((((......))(((((((....(((((.(((....(((((((((.......))).))))))))).)))))....))))))).))))...)))).))..))))

Structure
au    -a  c    aaa    gggaucggcc       AUUC     G   CGGU      -   aa 
  ggaa  gu ggug   ccuu          agauCCG    GAGGU UGA    Uucguu cga  u
  ||||  || ||||   ||||          |||||||    ||||| |||    |||||| |||  u
  ucuu  ca uuac   ggga          uuuaggc    cuccg acu    aagcaa guu  a
--    ag  a    cag    ---------a       guuu     g   ----      c   cg 


Annotation confidence Not enough data
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Genome context
CM000059.5: 7969149-7969270 [+]

Database links

Mature ame-miR-3722-5p

Accession MIMAT0018550
Description Apis mellifera ame-miR-3722-5p mature miRNA
Sequence 36 - CCGAUUCGAGGUGUGACGGUU - 56
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805