miRBase entry: ame-mir-3777

Stem-loop ame-mir-3777


Accession
MI0016184
Description
Apis mellifera ame-mir-3777 precursor miRNA


Sequence

aaugaaaggucugcgaggaggaaagcucucuuuuauuaaacgaaaaauuggaucgcgcuugucggaaugcaauauuucgacggauucauuuggUGGAAACAUUUCUUCCCUGGGAaaaaauucaa
..((((...(((..(.((((((((......((((((((((........((((((.....((((((((((...))))))))))))))))))))))))))...)))))))))..))).....)))).

Structure
aa    --agg   gc a        gcucuc          cgaaaaau      gcgcu          c 
  ugaa     ucu  g ggaggaaa      uuuuauuaaa        uggauc     ugucggaaug  
  ||||     |||  | ||||||||      ||||||||||        ||||||     |||||||||| a
  acuu     AGG  C CCUUCUUU      AAGGUgguuu        acuuag     gcagcuuuau  
-a    aaaaa   GU -        ---ACA          --------      -----          a 


Annotation confidence Not enough data
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Genome context
CM000067.5: 4309096-4309220 [+]

Database links

Mature ame-miR-3777-3p

Accession MIMAT0018554
Description Apis mellifera ame-miR-3777-3p mature miRNA
Sequence 94 - UGGAAACAUUUCUUCCCUGGGA - 115
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226