miRBase entry: ame-mir-3783

Stem-loop ame-mir-3783


Accession
MI0016191
Description
Apis mellifera ame-mir-3783 precursor miRNA

Literature search
1 open access papers mention ame-mir-3783
(1 sentences)

Sequence

aagaggacgaagaagugagauggugucaucccaccaaacaagugagagugugucaauauaggucuaUACUUUCAAUUGUUUGAUGAGGUgaaaucauucuaauaauugacguuuucug
.((((((((..((....(((((((.(((((.((.(((((((.((((((((((((......))..)))))))))).))))))).)).))))).)))).))).....))..)))))))).

Structure
a        aa  -agug   -    g     c  c       g          --  aa 
 agaggacg  ga     aga uggu ucauc ca caaacaa ugagagugug  uc  u
 ||||||||  ||     ||| |||| ||||| || ||||||| ||||||||||  ||   
 ucuuuugc  uu     ucu acua agUGG GU GUUUGUU ACUUUCAUau  gg  a
g        ag  aauaa   u    a     A  A       A          cu  au 


Annotation confidence Not enough data
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Genome context
CM000064.5: 3872320-3872437 [+]

Database links

Mature ame-miR-3783-3p

Accession MIMAT0018561
Description Apis mellifera ame-miR-3783-3p mature miRNA
Sequence 67 - UACUUUCAAUUGUUUGAUGAGGU - 89
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670