miRBase entry: ame-mir-3785

Stem-loop ame-mir-3785


Accession
MI0016194
Description
Apis mellifera ame-mir-3785 precursor miRNA


Sequence

gcguaaaugugucucgauucuccuugggaggucucacgacgugauagcggcgcccgacucucgaaauuguggUACCCUGUAACGUCCUGAGACUuccugcggggaucugucgacccacuuuguccu
........(((..((((((((((.((((((((((((.(((((.((((.((.((((((.........))).))).)))))).))))).)))))))))))).)))))...)))))..)))........

Structure
gcguaaau   uc     ---     u            c     g    c  c   -   cuc 
        gug  ucgau   ucucc ugggaggucuca gacgu auag gg gcc cga   u
        |||  |||||   ||||| |||||||||||| ||||| |||| || ||| |||   c
        cac  agcug   agggg guccuUCAGAGU CUGCA UGUC CC Ugg guu   g
uccuguuu   cc     ucu     c            C     A    -  A   u   aaa 


Annotation confidence Not enough data
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Genome context
CM000068.5: 11271240-11271365 [-]

Database links

Mature ame-miR-3785-3p

Accession MIMAT0018564
Description Apis mellifera ame-miR-3785-3p mature miRNA
Sequence 73 - UACCCUGUAACGUCCUGAGACU - 94
Evidence experimental
SOLID [1], Illumina [2-3]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  3. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226