Stem-loop ame-mir-3787

Accession

MI0016196

Description

Apis mellifera ame-mir-3787 precursor miRNA

Sequence

caucacgcguuauauagggaaucgauaaaacGAGUCGAGCUUGUGUGUGGAAacguucuaacaacauuguggaacaaaccagcgcgucaaaaauugcuucaauuuuguaaauaucgacagguuuuguaacccgugauu
.((((((.((((((.((....((((((..(((((..((((((((((((((....((((((.((....))))))))...))).)))).))).....))))....)))))...))))))....)).)))))).)))))).

Structure

c      c      u  ggaa      -aa     --UC    -----   -    -   AAac      a  a 
 aucacg guuaua ag    ucgaua   acGAG    GAGC     UUG UGUG UGG    guucua ca c
 |||||| |||||| ||    ||||||   |||||    ||||     ||| |||| |||    |||||| ||  
 uagugc caaugu uu    agcuau   uguuu    uucg     aac gcgc acc    caaggu gu a
u      c      u  ggac      aaa     uaac    uuaaa   u    g   -aaa      -  u 

Annotation confidence Not enough data

Genome context

CM000065.5: 5148158-5148295 [-]

Mature ame-miR-3787-5p

• Accession: MIMAT0018566
• Description: Apis mellifera ame-miR-3787-5p mature miRNA
• Sequence: 32 - GAGUCGAGCUUGUGUGUGGAA - 52
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805