miRBase entry: ame-mir-3790

Stem-loop ame-mir-3790


Accession
MI0016199
Description
Apis mellifera ame-mir-3790 precursor miRNA


Sequence

aGAAAGCGAUUAAGCGAUCGAGgagucugggcggugagaaaaaucugccaagacgcuugguuacguugaagaggaagagagagggaggaucgcgaucc
.((..((((((..(.(((((((..((((.(((((..........))))).)))).))))))).).......................))))))..)).

Structure
a  AA      ---------------------AA C       ga    g     ugag 
 GA  GCGAUU                       G GAUCGAG  gucu ggcgg    a
 ||  ||||||                       | |||||||  |||| |||||     
 cu  cgcuag                       c uugguuc  caga ccguc    a
c  ag      gagggagagagaaggagaaguug a       -g    a     uaaa 


Annotation confidence Not enough data
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Genome context
CM000065.5: 9579873-9579970 [+]

Database links

Mature ame-miR-3790-5p

Accession MIMAT0018569
Description Apis mellifera ame-miR-3790-5p mature miRNA
Sequence 2 - GAAAGCGAUUAAGCGAUCGAG - 22
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805