miRBase entry: tca-mir-3803

Stem-loop tca-mir-3803


Accession
MI0016257
Description
Tribolium castaneum tca-mir-3803 precursor miRNA


Sequence

cacacgaggGAAUAUUAAAAAUGGAGGUAcauaacguucuguugcgccaaUAAUGUCCACCAUUGUAACUGGUGUCccucuucca
.....((((((.(((((..(((((.((.((((..(((......)))......)))))).))))).....))))))))))).....

Structure
cacac      A     ---AA     A  U    ----aa   uc 
     gaggGA UAUUA     AAUGG GG Acau      cgu  u
     |||||| |||||     ||||| || ||||      |||   
     cuccCU GUGGU     UUACC CC UGUA      gcg  g
accuu      -     CAAUG     A  -    AUaacc   uu 


Annotation confidence Not enough data
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Genome context
ChLG10: 1683028-1683112 [+]

Database links

Mature tca-miR-3803-5p

Accession MIMAT0018622
Description Tribolium castaneum tca-miR-3803-5p mature miRNA
Sequence 10 - GAAUAUUAAAAAUGGAGGUA - 29
Evidence experimental
SOLID [1]

Mature tca-miR-3803-3p

Accession MIMAT0018623
Description Tribolium castaneum tca-miR-3803-3p mature miRNA
Sequence 51 - UAAUGUCCACCAUUGUAACUGGUGUC - 76
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696