miRBase entry: tca-mir-2765

Stem-loop tca-mir-2765


Accession
MI0016261
Description
Tribolium castaneum tca-mir-2765 precursor miRNA
Gene family
MIPF0001008; mir-2765


Sequence

aaaaguaccgaaauucuuggauauagugaggagUGGUAACUCCACCACCGUUGGCguguguuguacugcCAGCGGUCGAGGAGUUCCUUAACcucgcuguaauucuccaaaggacaagguaaguug
.....((((....((((((((((((((((((...((.((((((.(.((((((((((.(((...))))))))))))).).))))))))....))))))))))....))).)))))...)))).....

Structure
aaaag    gaaa     -   ----          -agU  U      A C          u   u 
     uacc    uucuu gga    uauagugagg    GG AACUCC C ACCGUUGGCg gug  
     ||||    ||||| |||    ||||||||||    || |||||| | |||||||||| ||| u
     augg    aggaa ccu    augucgcucC    CC UUGAGG G UGGCGACcgu cau  
guuga    -aac     a   cuua          AAUU  -      A C          -   g 


Annotation confidence Not enough data
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Genome context
ChLG10: 4216016-4216141 [-]

Database links

Mature tca-miR-2765-5p

Accession MIMAT0018630
Description Tribolium castaneum tca-miR-2765-5p mature miRNA
Sequence 34 - UGGUAACUCCACCACCGUUGGC - 55
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-2765-3p

Accession MIMAT0018631
Description Tribolium castaneum tca-miR-2765-3p mature miRNA
Sequence 70 - CAGCGGUCGAGGAGUUCCUUAAC - 92
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696