miRBase entry: tca-mir-3844

Stem-loop tca-mir-3844


Accession
MI0016314
Description
Tribolium castaneum tca-mir-3844 precursor miRNA


Sequence

auuuauguuuugagAGGCACCUCAGAAAACCCCACGCacauguuuguacaaAUUGUGUGUGAUAAAAUGAGGUGCCAgagcaaauug
.....((((((....(((((((((........(((((((((((....)))...))))))))......))))))))))))))).....

Structure
auuua      gagA         GAAAACCC        ---   u 
     uguuuu    GGCACCUCA        CACGCaca   ugu u
     ||||||    |||||||||        ||||||||   |||  
     acgagA    CCGUGGAGU        GUGUGUGU   aca g
guuaa      ----         --AAAAUA        UAa   u 


Annotation confidence Not enough data
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Genome context
ChLG3: 5628773-5628859 [-]

Database links

Mature tca-miR-3844-5p

Accession MIMAT0018734
Description Tribolium castaneum tca-miR-3844-5p mature miRNA
Sequence 15 - AGGCACCUCAGAAAACCCCACGC - 37
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3844-3p

Accession MIMAT0018735
Description Tribolium castaneum tca-miR-3844-3p mature miRNA
Sequence 52 - AUUGUGUGUGAUAAAAUGAGGUGCCA - 77
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696