miRBase entry: tca-mir-3854

Stem-loop tca-mir-3854


Accession
MI0016329
Description
Tribolium castaneum tca-mir-3854 precursor miRNA


Sequence

cgacACCACAAUCCCAGCUCCACauuauugcauuucaaaaauaaUAGUGGCGUUUAGUAUUGUGGaaauu
.....((((((((..(((.((((((((((..........)))))).)))).)))..).))))))).....

Structure
cgacA       - CC   U    -      gcau 
     CCACAAU C  AGC CCAC auuauu    u
     ||||||| |  ||| |||| ||||||     
     GGUGUUA G  UUG GGUG Uaauaa    u
uuaaa       U AU   C    A      aaac 


Annotation confidence Not enough data
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Genome context
ChLG5: 2503217-2503286 [-]

Database links

Mature tca-miR-3854-5p

Accession MIMAT0018764
Description Tribolium castaneum tca-miR-3854-5p mature miRNA
Sequence 5 - ACCACAAUCCCAGCUCCAC - 23
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3854-3p

Accession MIMAT0018765
Description Tribolium castaneum tca-miR-3854-3p mature miRNA
Sequence 45 - UAGUGGCGUUUAGUAUUGUGG - 65
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696