miRBase entry: tca-mir-29

Stem-loop tca-mir-29


Accession
MI0016349
Description
Tribolium castaneum tca-mir-29 precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
2 open access papers mention tca-mir-29
(2 sentences)

Sequence

uuugugguggaacaauaguuguaggauuuggcuuugggcACUGUUUUCGUGUGGUGGUGAGauuuuauuuugauucUAGCACCAUAUGAAAUCAGUUCuuguaccaaauaccagcgaaauacaccaagug
....(((((.........((((.((((((((....(((.((((.((((((((((((.((.((((.......)))).)).)))))))))))).)))))))....)))))).)).))))....)))))....

Structure
uuug     gaacaauag    a  -      cuuu   c    U            G  A    uu 
    uggug         uugu gg auuugg    ggg ACUG UUUCGUGUGGUG UG Gauu  a
    |||||         |||| || ||||||    ||| |||| |||||||||||| || ||||  u
    accac         agcg cc uaaacc    uCU UGAC AAAGUAUACCAC AU uuag  u
guga     -----auaa    a  a      augu   -    U            G  c    uu 


Annotation confidence Not enough data
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Genome context
ChLG9: 2711697-2711826 [+]

Database links

Mature tca-miR-29-5p

Accession MIMAT0018802
Description Tribolium castaneum tca-miR-29-5p mature miRNA
Sequence 40 - ACUGUUUUCGUGUGGUGGUGAG - 61
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-29-3p

Accession MIMAT0018803
Description Tribolium castaneum tca-miR-29-3p mature miRNA
Sequence 77 - UAGCACCAUAUGAAAUCAGUUC - 98
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696