miRBase entry: tca-mir-989

Stem-loop tca-mir-989


Accession
MI0016359
Description
Tribolium castaneum tca-mir-989 precursor miRNA

Literature search
1 open access papers mention tca-mir-989
(1 sentences)

Sequence

uuuuugcucccaagguccCGCCACUAGGUCGCAUAACACgcauugucaacaccgUGUGAUGUGACGUAGUGGuaugucuaggggaguugccu
.....((((((..((.(..(((((((.(((((((.(((((...((....)).))))).))))))).)))))))..).))..)))))).....

Structure
uuuuu      aa  u cC       G       A     cau  u 
     gcuccc  gg c  GCCACUA GUCGCAU ACACg   ug c
     ||||||  || |  ||||||| ||||||| |||||   ||  
     ugaggg  uc g  uGGUGAU CAGUGUA UGUgc   ac a
uccgu      ga  u ua       G       G     --c  a 


Annotation confidence Not enough data
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Genome context
ChLG4: 193393-193484 [+]

Database links

Mature tca-miR-989-5p

Accession MIMAT0018822
Description Tribolium castaneum tca-miR-989-5p mature miRNA
Sequence 19 - CGCCACUAGGUCGCAUAACAC - 39
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-989-3p

Accession MIMAT0018823
Description Tribolium castaneum tca-miR-989-3p mature miRNA
Sequence 55 - UGUGAUGUGACGUAGUGG - 72
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696